DNA Computing and Molecular Programming: 16th International by Yuriy Brun (auth.), Yasubumi Sakakibara, Yongli Mi (eds.)

By Yuriy Brun (auth.), Yasubumi Sakakibara, Yongli Mi (eds.)

This booklet constitutes the completely refereed post-conference
proceedings of the sixteenth overseas convention on DNA Computing and Molecular Programming, DNA16, held in Hong Kong, China, in June 2010.

The sixteen revised complete papers provided have been rigorously chosen in the course of rounds of reviewing and development from fifty nine submissions. The papers are good balanced among theoretical and experimental paintings and deal with all parts that relate to biomolecular computing, together with demonstrations of biomolecular computing, theoretical types of biomolecular computing, biomolecular algorithms, computational techniques in vitro and in vivo, research and theoretical types of laboratory recommendations, biotechnological and different functions of DNA computing, DNA nanostructures, DNA units resembling DNA automobiles, DNA mistakes overview and correction, in vitro evolution, molecular layout, self-assembled platforms, nucleic acid chemistry, and simulation tools.

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Additional resources for DNA Computing and Molecular Programming: 16th International Conference, DNA 16, Hong Kong, China, June 14-17, 2010, Revised Selected Papers

Example text

This would lead to a negative feedback loop hampering signal amplification. Scalable, Time-Responsive, Digital, Energy-Efficient Molecular Circuits 33 halts and [p1o ] decays to concentration 0 through reaction (9). With [p1o ] = 0, reaction (7) cannot occur and production of P1o halts and [P1o ] decays to 0 through reaction (9). No reaction at this point can change a 0o to a 1o . Reactions (1) through (4) continue until all 1o are converted to 0o . At this point reaction (1) cannot occur, production of diff o halts, and [diff o ] decays to concentration 0 through reaction (9).

An improved autonomous DNA nanomotor. Nano Letters 7(9), 2574–2577 (2007) 6. : Error free self-assembly using error prone tiles. In: Proceedings of the 10th International Meeting on DNA Based Computers, pp. 62–75 (2004) 7. : Dimension augmentation and combinatorial criteria for efficient error-resistant DNA self-assembly. In: Proceedings of the 19th Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 409–418 (2008) 8. : Optimal self-assembly of counters at temperature two. In: Proceedings of the 1st Conference on Foundations of Nanoscience: SelfAssembled Architectures and Devices, pp.

Nature (394), 539–544 (August 1998) 32. : A DNA-fuelled molecular machine made of DNA. Nature (406), 605–608 (August 2000) 33. : Construction of a DNA-truncated octahedron. Journal of American Chemical Society 116(5), 1661 (1994) Scalable, Time-Responsive, Digital, Energy-Efficient Molecular Circuits Using DNA Strand Displacement Ehsan Chiniforooshan, David Doty, Lila Kari, and Shinnosuke Seki Univ. of Western Ontario, Dept. ca Abstract. We propose a novel theoretical biomolecular design to implement any Boolean circuit using the mechanism of DNA strand displacement.

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